Books

• A. Karaosmanoglu and E. Aydinli (eds.) (2020), Strateji Düşüncesi: Kuram, Paradoks, Uygulama, İstanbul: Bilgi Üniversitesi Yayınları
• E. Aydinli and G. Biltekin (eds) (2018), Widening the World of International Relations, London: Routledge.
• E. Aydinli (2016), Violent Non-State Actors: From Anarchists to Jihadists, London: Routledge.
• E. Aydinli (2010), Emerging Transnational (In)security Governance: A Statist Transnationalist Approach, London: Routledge.
• E. Aydinli, E. Kurubas & H. Ozdemir (2009), Yöntem, Kuram, Komplo Türk Uluslararası İlişkiler Disiplininde Vizyon Arayışları, Ankara: Asil Yayın Dağıtım.
• E. Aydinli & James N. Rosenau, eds. (2005), Paradigms in Transition: Globalization, Security, and the Nation State. Albany, NY: SUNY Press.

 Articles and Book Chapters

• “Elite Change and the Inception, Duration, and Demise of the Turkish–Israeli Alliance,” with Onur Erpul, Foreign Policy Analysis, vol. 17, no. 2 (April 2021), https://doi.org/10.1093/fpa/oraa021
• “Neither Ideological nor Geopolitical: Turkey Needs a ‘Growth’-Based Grand Strategy,” Perceptions, vol.25, no.2 (2021): pp.227– 252. 
• ““Büyük Strateji” Çıkmazı ve Türkiye için “Büyüme” Önermesi”, in Strateji Düşüncesi: Kuram, Paradoks, Uygulama, İstanbul: Bilgi Üniversitesi Yayınları, 2020.
• “Searching for Larger Status in Global Politics: Internationalization of Higher Education in Turkey,” with J. Mathews, Journal of Studies In International Education, 2020, doi: http://dx.doi.org/10.1177/1028315320932325
• “Methodology as a Lingua Franca in International Relations: Peripheral Self-reflections on Dialogue with the Core,” Chinese Journal of International Politics,  vol. 13, no.2 (2020): pp. 287-312.
• “Widening the world of IR: A typology of homegrown theorizing”, with G. Biltekin, All Azimuth, vol. 7, no. 1 (2018): pp. 45-68.
• “Time to quantify Turkey’s Foreign Affairs: Setting Quality Standards for a Maturing International Relations Discipline”, with G. Biltekin, International Studies Perspectives, vol. 18, no. 3 (2017): pp.  267–287.
• “Assessing Violent Non-State Actorness in Global Politics: A Framework for Analysis”, Cambridge Review of International Affairs, vol. 28, no. 3 (2015): pp.  424-444.
• “Overcoming the Reform-Security Dilemma for Orderly Transitions: The Turkish Experience as Model?” Democratization, 20 (2013): pp. 1144-1164.
• “A Fragile Peace: Turkey’s Civil-Military Transformation”, World Politics Review, 30 April, 2013.
• “Civil Military Relations Transformed,” Journal of Democracy, vol. 23, no. 1 (2012): pp. 100-108.
• “Quantifying intelligence cooperation: The United States International Intelligence Behavior (USIIB) dataset”, with M. Tuzuner, Journal of Peace Research, vol. 48, no. 5 (2011): pp. 673-682.
• “The Conflict Resolution and Counterterrorism Dilemma: Turkey Faces its Kurdish Question”, with N.A. Özcan, Terrorism and Political Violence, vol. 23, no. 3 (2011): pp. 438-457.
• Ergenekon, New Pacts, and the Decline of the Turkish “Inner State””, Turkish Studies, vol. 12, no. 2 (2011): pp. 227-239.
• “Transgovernmentalism Meets Security: Police Liaison Officers, Terrorism, and Statist Transnationalism”, with H. Yön, Governance: An International Journal of Policy, Administration, and Institutions, vol. 24, no. 1 (2011): pp. 55-84.
• “Governments vs States: decoding dual governance in the developing world”, Third World Quarterly, vol. 31, no. 5 (2010): pp. 693-707.
• “A Paradigmatic Shift for the Turkish Generals and an End to the Coup Era in Turkey”, The Middle East Journal, vol. 63, no. 4 (2009): pp. 581-596.
• “Before Jihadists there were Anarchists: A Failed Case of Transnational Violence”, Studies in Conflict and Terrorism, vol. 31, no. 10 (2008): pp. 903-923.
• “Periphery theorizing for a Truly International Discipline: Spinning IR Theory out of Anatolia”, with J. Mathews, Review of International Studies, vol. 34, no. 4 (2008): pp. 693-711.
• “Türkiye Uluslararası İlişkiler Disiplininde Özgün Kuram Potansiyeli: Anadolu Ekolünü Oluşturmak Mümkün mü?”, with J. Mathews, Uluslararası İlişkiler Dergisi, vol. 5, no. 17 (2008): pp. 161-187.
• “Towards Homegrown Theorizing and Building a Disciplinary Community in Turkish IR”, with J. Mathews, in International Relations Scholarship Around the World, Ole Waever & Arlene Tickner eds., ch. 10, London: Routledge, 2008.
• “The Turkish Military’s March Toward Europe”, with N.A. Ozcan, and D. Akyaz, Foreign Affairs, vol. 85, no. 1 (2006): pp. 77.
• “From Finances to Transnational Mobility: Searching for the Global Jihadists’ Achilles Heel”, Terrorism and Political Violence, vol. 18, no. 2 (2006): pp. 301-313.
• “Anarchy meets globalization: A new security dilemma for the modernizing state”, in Paradigms in Transition: Globalization, Security, and the Nation State, E. Aydinli & J.N. Rosenau eds., Albany: SUNY Press, 2005.
• “Conclusion: Seeking conceptual links for changing paradigms”, in Paradigms in Transition: Globalization, Security, and the Nation State, E. Aydinli & J.N. Rosenau, eds., Albany: SUNY Press, 2005.
• “Courage versus Caution: A Dialogue on Entering and Prospering in IR”, with J.N. Rosenau, International Studies Review, vol. 6, no. 3 (2004): pp. 511-526.
• “Globalization at work: Turkey from Middle East to European integration”, in Persistent Permeability?: Regionalism, Localism, and Globalization in the Middle East, R. Brynen & B. Salloukh eds., New York: Ashgate Publishing, 2004.
• “The Turkish pendulum between globalization and security: From the late Ottoman period to the early Republican era”, Middle Eastern Studies, vol. 40, no. 3 (2004): pp. 102-133.
• “Winning a low-intensity conflict: Drawing lessons from the Turkish case”, with Ü. Özdağ, Review of International Affairs, vol. 3, no. 1 (2003).
• “Between Security and Liberalization: Decoding Turkey’s Political Struggle with the PKK”, Security Dialogue, vol. 33, no. 2 (2002): pp. 209-225.
• “Turkey and the European Union: Looking towards Europe”, with A.R. Usul, World Today, vol. 58, no. 10, 2002.
• “A Dream become Nightmare? Turkey’s Entry into the European Union”, with D. Waxman, Current History, vol. 100, no. 649 (2001): pp. 381.
• “Are the Core and Periphery Irreconcilable? The Curious World of Publishing in International Relations“, with J. Mathews, International Studies Perspectives, vol. 1, no. 3 (2000): pp. 289-303.